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pnp protein (Syntrophomonas wolfei) - STRING interaction network
"pnp" - Polyribonucleotide nucleotidyltransferase in Syntrophomonas wolfei
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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pnpPolyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3’- to 5’-direction (703 aa)    
Predicted Functional Partners:
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1107 aa)
 
 
  0.969
rpoC
DNA-directed RNA polymerase subunit beta’; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1181 aa)
   
 
  0.958
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta’ subunit thereby facilitating its interaction with the beta and alpha subunits (71 aa)
   
 
  0.955
adk
Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family (215 aa)
     
 
  0.953
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (316 aa)
     
  0.948
pyrH
Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP (238 aa)
   
 
  0.933
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP (195 aa)
   
 
  0.918
cmk
KEGG- mta-Moth_1331 cytidylate kinase; Belongs to the cytidylate kinase family. Type 1 subfamily (219 aa)
   
 
  0.917
Swol_2040
KEGG- tte-TTE1815 pyruvate kinase; Belongs to the pyruvate kinase family (582 aa)
   
 
    0.905
Swol_2420
KEGG- dsy-DSY4945 hypothetical protein (77 aa)
         
    0.900
Your Current Organism:
Syntrophomonas wolfei
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei, Syntrophomonas wolfei Goettingen, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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