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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_0908KEGG: tte:TTE1386 predicted xylanase/chitin deacetylase. (235 aa)    
Predicted Functional Partners:
Swol_0909
KEGG: mta:Moth_1058 serine-type D-Ala-D-Ala carboxypeptidase; Belongs to the peptidase S11 family.
  
  
 0.802
Swol_0907
KEGG: oih:OB1366 hypothetical protein.
       0.705
Swol_1908
Glycosyltransferases involved in cell wall biogenesis-like protein; KEGG: pca:Pcar_1758 putative glycosyl transferase.
  
  
 0.617
Swol_0910
KEGG: chy:CHY_1148 peptidase, M16 family; Belongs to the peptidase M16 family.
  
    0.531
dut
Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.
       0.487
Swol_0912
KEGG: mta:Moth_1062 hypothetical protein.
       0.469
Swol_2439
KEGG: ade:Adeh_3521 glycosyl transferase, family 2.
 
  
 0.458
Swol_2158
KEGG: cac:CAC2523 glycosyltransferase.
 
  
 0.428
Swol_0059
KEGG: sth:STH1375 hypothetical protein.
  
  
 0.422
Swol_0624
KEGG: bcl:ABC0513 glycosyltransferase.
  
  
 0.422
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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