STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_0936Transcriptional regulator, ArsR family; KEGG: lpl:pWCFS103_10 regulator of arsenical resistance. (113 aa)    
Predicted Functional Partners:
Swol_0938
KEGG: ctc:CTC01894 arsenical pump-driving ATPase.
 
   
 0.887
Swol_0937
KEGG: bth:BT0801 arsenical resistance operon trans-acting repressor.
 
   
 0.884
Swol_0939
KEGG: dsy:DSY4599 hypothetical protein.
 
  
 0.786
Swol_0935
KEGG: blo:BL0786 LysR-type transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
 
  
 0.509
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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