STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_0946Hypothetical protein; KEGG: tte:TTE0174 Flagellum-specific muramidase. (119 aa)    
Predicted Functional Partners:
Swol_0858
KEGG: bbu:BB0283 flagellar hook protein.
 
  
 0.967
Swol_0846
Conserved hypothetical protein; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
 
 0.966
Swol_0192
KEGG: mta:Moth_0746 flagellar hook-associated protein; Belongs to the flagella basal body rod proteins family.
 
  
 0.963
Swol_0847
KEGG: tte:TTE1444 flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
 
  
 0.962
Swol_0849
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
  
  
 0.946
Swol_1793
KEGG: sat:SYN_02359 serine phosphatase RsbU, regulator of sigma subunit.
   
    0.940
Swol_0855
KEGG: tte:TTE1436 putative flagellar hook-length control protein FliK.
 
  
 0.931
Swol_0947
KEGG: dvu:DVU0513 flagellar basal-body rod protein FlgG.
 
 
 0.908
Swol_0851
Flagellar biosynthesis/type III secretory pathway protein-like protein; KEGG: mta:Moth_0773 flagellar assembly protein FliH.
 
  
 0.887
Swol_0860
Flagellar protein (FliL)-like protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
 
  
 0.864
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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