STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_0963KEGG: tte:TTE1573 hypothetical protein. (105 aa)    
Predicted Functional Partners:
Swol_1444
KEGG: mta:Moth_0580 hypothetical protein.
  
     0.764
Swol_0249
KEGG: chy:CHY_0171 hypothetical protein.
  
     0.709
Swol_0562
KEGG: mta:Moth_1522 protein of unknown function DUF322.
  
     0.696
Swol_0964
Transcriptional regulators, TraR/DksA family; KEGG: tte:TTE1572 DnaK suppressor protein.
 
     0.691
Swol_1336
KEGG: mta:Moth_1325 hypothetical protein.
  
     0.633
Swol_1880
KEGG: mta:Moth_2166 putative transcriptional regulator, CopG family.
  
     0.632
Swol_2537
KEGG: cac:CAC3720 hypothetical protein.
  
     0.609
Swol_0931
KEGG: tte:TTE1683 hypothetical protein.
  
     0.606
Swol_1340
KEGG: mta:Moth_1327 protein of unknown function DUF1614.
  
     0.598
Swol_1259
KEGG: mta:Moth_1076 hypothetical protein.
  
     0.577
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.