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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_0997KEGG: mac:MA2372 hypothetical protein. (706 aa)    
Predicted Functional Partners:
Swol_0994
Hypothetical protein; KEGG: chy:CHY_2653 putative restriction enzyme.
     0.981
Swol_0991
KEGG: gsu:GSU2107 hypothetical protein.
     0.972
Swol_0999
KEGG: mhu:Mhun_1906 ATP-dependent protease La.
 
    0.954
Swol_0998
KEGG: eli:ELI_14750 hypothetical protein.
 
     0.948
Swol_0990
KEGG: mma:MM0154 hypothetical protein.
 
    0.856
Swol_2256
Type I restriction-modification system, R subunit; Subunit R is required for both nuclease and ATPase activities, but not for modification.
  
 
 0.842
Swol_2494
KEGG: chy:CHY_2654 hypothetical protein.
 
    0.832
Swol_2488
KEGG: chy:CHY_2651 ATP-dependent Lon protease.
 
    0.831
Swol_2496
KEGG: dsy:DSY0675 hypothetical protein.
 
    0.830
Swol_2257
Restriction endonuclease S subunits-like protein; KEGG: mja:MJ1218 type I restriction-modification enzyme, S subunit, putative.
 
 
 0.825
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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