STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_0999KEGG: mhu:Mhun_1906 ATP-dependent protease La. (679 aa)    
Predicted Functional Partners:
Swol_0997
KEGG: mac:MA2372 hypothetical protein.
 
    0.954
Swol_0998
KEGG: eli:ELI_14750 hypothetical protein.
 
     0.937
Swol_2493
KEGG: mma:MM0156 type IIS restriction enzyme.
 
  
 0.933
Swol_0990
KEGG: mma:MM0154 hypothetical protein.
 
  
 0.922
Swol_2496
KEGG: dsy:DSY0675 hypothetical protein.
 
  
 0.913
Swol_2494
KEGG: chy:CHY_2654 hypothetical protein.
 
  
 0.911
Swol_0994
Hypothetical protein; KEGG: chy:CHY_2653 putative restriction enzyme.
 
    0.879
Swol_2495
KEGG: chy:CHY_2655 hypothetical protein.
 
    0.871
Swol_0991
KEGG: gsu:GSU2107 hypothetical protein.
 
    0.854
Swol_2491
KEGG: dsy:DSY0677 hypothetical protein.
 
    0.831
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.