STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_1007KEGG: mta:Moth_1764 glutamine synthetase, type I. (442 aa)    
Predicted Functional Partners:
Swol_2099
Glutamine--fructose-6-phosphate transaminase (isomerizing); KEGG: ctc:CTC02543 D-fructose-6-phosphate amidotransferase.
 
 
 0.938
carA
KEGG: ser:SERP0768 carbamoyl-phosphate synthase, small subunit; Belongs to the CarA family.
  
 
 0.920
Swol_1787
KEGG: mta:Moth_2299 glutamine synthetase, type I.
  
  
 
0.919
carB
KEGG: mta:Moth_0882 carbamoyl-phosphate synthase, large subunit; Belongs to the CarB family.
  
 
 0.918
Swol_2170
KEGG: sat:SYN_01242 glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 
 0.917
Swol_0408
KEGG: dsy:DSY3569 nitrogenase subunit NifH; Belongs to the NifH/BchL/ChlL family.
   
 
 0.915
purF
Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.
    
 0.912
Swol_1521
KEGG: sth:STH729 cytochrome C nitrite reductase catalytic subunit; Belongs to the cytochrome c-552 family.
     
 0.907
Swol_1522
Respiratory nitrite reductase specific menaquinol--cytochrome-c reductase (NrfH) precursor; KEGG: dsy:DSY2471 cytochrome c nitrite reductase small subunit NrfH.
     
 0.904
hcp
Hybrid cluster protein; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
     
 0.900
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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