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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_1010KEGG: mma:MM0032 hypothetical protein. (74 aa)    
Predicted Functional Partners:
Swol_1009
KEGG: mhu:Mhun_2778 protein of unknown function UPF0150.
 
 
 
 0.969
Swol_0620
KEGG: mac:MA0764 hypothetical protein.
 
 
 
 0.866
Swol_1541
KEGG: mhu:Mhun_2778 protein of unknown function UPF0150.
 
 
 
 0.864
Swol_0621
KEGG: mta:Moth_0484 YcfA-like.
  
     0.769
Swol_1569
KEGG: dsy:DSY3841 hypothetical protein.
   
 
 0.703
Swol_1660
KEGG: chy:CHY_2497 hypothetical protein.
   
 
 0.703
Swol_2504
KEGG: fra:Francci3_4084 conserved hypothetical protein.
  
     0.667
Swol_0795
KEGG: mta:Moth_2147 2-oxoisovalerate dehydrogenase, E1 component beta subunit.
 
 
 
 0.651
Swol_2505
KEGG: xfa:XF2030 hypothetical protein.
  
     0.643
Swol_0218
KEGG: eli:ELI_09120 hypothetical protein.
 
 
 
 0.607
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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