STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_1047KEGG: mta:Moth_1455 hypothetical protein. (230 aa)    
Predicted Functional Partners:
Swol_1045
KEGG: mta:Moth_1457 cobalt transport protein.
 
 
 0.962
Swol_1046
KEGG: mta:Moth_1456 ABC transporter related.
     0.940
Swol_1044
KEGG: ctc:CTC00758 membrane protein.
 
     0.843
Swol_1950
ABC-type cobalt transport system permease component CbiQ and related transporters-like protein; KEGG: chy:CHY_2277 cobalt ABC transporter, permease protein.
 
 
 0.788
Swol_1947
KEGG: sth:STH3043 cobalt ABC transporter permease protein.
  
 
 0.753
Swol_2300
KEGG: sth:STH3043 cobalt ABC transporter permease protein.
  
 
 0.753
Swol_1043
Hypothetical protein; KEGG: mta:Moth_1459 Ig-like, group 2.
 
     0.531
Swol_1048
KEGG: bcz:BCZK0420 formate C-acetyltransferase (formate acetyltransferase) (pyruvate formate-lyase).
       0.451
Swol_0134
Hypothetical protein; KEGG: mta:Moth_2342 outer membrane protein-like.
 
   
 0.448
Swol_2301
KEGG: cpe:CPE2373 probable ABC transporter.
 
 
 0.441
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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