STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_1048KEGG: bcz:BCZK0420 formate C-acetyltransferase (formate acetyltransferase) (pyruvate formate-lyase). (742 aa)    
Predicted Functional Partners:
Swol_1049
Pyruvate formate lyase activating enzyme; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family.
 
  
 0.990
Swol_0767
Phosphotransacetylase; KEGG: ctc:CTC01239 phosphate acetyltransferase.
   
 
 0.949
Swol_2040
KEGG: tte:TTE1815 pyruvate kinase; Belongs to the pyruvate kinase family.
  
 
 0.947
Swol_0558
KEGG: chy:CHY_1999 oxaloacetate decarboxylase, alpha subunit.
     
 0.929
Swol_2146
KEGG: mac:MA3792 acetolactate synthase large subunit.
     
 0.915
Swol_1376
Pyruvate ferredoxin oxidoreductase, delta subunit; KEGG: ctc:CTC02527 pyruvate synthase subunit porD.
    
 0.913
Swol_2236
KEGG: sai:Saci_2251 pyruvate synthase delta chain.
    
 0.913
Swol_1512
KEGG: mta:Moth_0607 pyruvate, phosphate dikinase; Belongs to the PEP-utilizing enzyme family.
    
 0.912
Swol_0308
Acetyl-CoA C-acetyltransferase; KEGG: gme:Gmet_2213 thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
     
 0.911
Swol_0675
Acetyl-CoA C-acetyltransferase; KEGG: gme:Gmet_2213 thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
     
 0.911
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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