STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_1099KEGG: btk:BT9727_1208 poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. (368 aa)    
Predicted Functional Partners:
Swol_1242
KEGG: tte:TTE0551 predicted acyl dehydratase.
 
 
 0.933
Swol_1145
KEGG: bja:bll4548 hypothetical protein.
  
  
 
0.927
Swol_1355
KEGG: tte:TTE0551 predicted acyl dehydratase.
 
 
 0.926
Swol_1356
KEGG: ctc:CTC00706 (de)hydratase mit MaoC domain.
 
 
 0.926
Swol_1241
KEGG: btk:BT9727_1208 poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit.
  
  
 
0.903
Swol_1098
KEGG: bca:BCE1428 PhaR protein.
       0.701
Swol_1097
KEGG: dsy:DSY5041 hypothetical protein.
       0.585
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.