STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_1109Peptidoglycan glycosyltransferase; KEGG: mta:Moth_1710 penicillin-binding protein 1A. (795 aa)    
Predicted Functional Partners:
Swol_0921
KEGG: gka:GK3406 penicillin-binding protein.
 
 
0.945
Swol_0612
Serine-type D-Ala-D-Ala carboxypeptidase; KEGG: dsy:DSY2305 hypothetical protein; Belongs to the peptidase S11 family.
  
 
 0.918
Swol_0909
KEGG: mta:Moth_1058 serine-type D-Ala-D-Ala carboxypeptidase; Belongs to the peptidase S11 family.
  
 
 0.916
Swol_0958
KEGG: tte:TTE1596 Cell division initiation protein.
   
 
 0.874
Swol_1638
KEGG: mta:Moth_0540 peptidoglycan glycosyltransferase.
 
 
 
 0.827
Swol_0820
Peptidoglycan glycosyltransferase; KEGG: mta:Moth_0837 stage V sporulation protein D.
 
 
0.825
Swol_0489
Peptidoglycan glycosyltransferase; KEGG: tte:TTE1258 cell division protein FtsI/penicillin-binding protein 2.
 
 
0.770
rodA
Rod shape-determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.
 
 
 
 0.688
Swol_2406
Peptidase M23B; KEGG: mta:Moth_2401 peptidase M23B.
  
  
 0.685
Swol_2472
Peptidase M23B; KEGG: mta:Moth_2422 peptidase M23B.
  
  
 0.638
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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