STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_1127KEGG: chy:CHY_1923 putative stage II sporulation protein P. (317 aa)    
Predicted Functional Partners:
Swol_1340
KEGG: mta:Moth_1327 protein of unknown function DUF1614.
     0.810
Swol_1567
KEGG: mta:Moth_0592 putative stage IV sporulation YqfD.
  
   
 0.781
Swol_0552
KEGG: tte:TTE1285 hypothetical protein.
  
  
 0.771
Swol_1322
Conserved hypothetical protein; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
 
   
 0.761
Swol_0589
SpoIVB peptidase. Serine peptidase. MEROPS family S55; KEGG: dsy:DSY2342 hypothetical protein.
  
   
 0.756
Swol_0627
KEGG: mta:Moth_1375 stage V sporulation AD.
  
   
 0.745
Swol_0834
Sporulation factor SpoIIGA. Unknown type peptidase. MEROPS family U04; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family.
  
   
 0.741
Swol_0948
Conserved hypothetical protein; KEGG: mta:Moth_0855 PRC-barrel.
  
     0.740
Swol_0626
KEGG: tte:TTE1319 spore formation protein spoVAC.
  
    0.732
Swol_0764
KEGG: btk:BT9727_3670 hypothetical protein.
  
   
 0.727
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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