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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_1133KEGG: mta:Moth_1152 hypothetical protein. (123 aa)    
Predicted Functional Partners:
Swol_0555
KEGG: mta:Moth_1531 hypothetical protein.
  
    0.765
Swol_1786
KEGG: mta:Moth_2110 hypothetical protein.
  
     0.747
Swol_0915
Response regulator receiver protein; KEGG: mta:Moth_1106 hypothetical protein.
  
     0.711
Swol_1434
KEGG: mta:Moth_1703 hypothetical protein.
  
     0.704
Swol_2470
KEGG: mta:Moth_2418 hypothetical protein.
  
     0.701
Swol_0131
KEGG: mta:Moth_2363 putative transmembrane transcriptional regulator (anti-sigma factor).
  
     0.685
Swol_1644
Hypothetical protein.
  
     0.683
Swol_0086
KEGG: tte:TTE2446 hypothetical protein.
  
     0.658
Swol_0134
Hypothetical protein; KEGG: mta:Moth_2342 outer membrane protein-like.
  
     0.628
Swol_2536
KEGG: dsy:DSY5032 hypothetical protein.
  
     0.621
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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