STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_1135Xanthine dehydrogenase, molybdenum binding subunit apoprotein; KEGG: ppr:PBPRA1941 hypothetical xanthine dehydrogenase. (713 aa)    
Predicted Functional Partners:
Swol_1136
KEGG: chy:CHY_0691 2Fe-2S iron-sulfur cluster binding domain.
 
 0.999
Swol_1818
(2Fe-2S)-binding; KEGG: mta:Moth_1961 (2Fe-2S)-binding.
 
 0.995
Swol_1137
KEGG: ppr:PBPRA1939 hypothetical dehydrogenase.
 
 0.989
Swol_1819
KEGG: eba:ebA2062 medium FAD-binding subunit of molybdenum enzyme.
 
 0.981
Swol_1138
Xanthine and CO dehydrogenases maturation factor XdhC/CoxF family-like protein; KEGG: ctc:CTC01880 alcohol dehydrogenase [cytochrome c-553], gamma chain-like protein.
 
  
 0.903
Swol_0029
KEGG: aba:Acid345_2647 protein of unknown function DUF182.
 
  
 0.810
Swol_1816
KEGG: dsy:DSY1981 hypothetical protein.
 
   
 0.676
Swol_1814
KEGG: pca:Pcar_0227 hypothetical protein.
 
  
 0.562
Swol_1134
Hypothetical protein; KEGG: ctc:CTC02472 molybdopterin-guanine dinucleotide biosynthesis protein A.
       0.458
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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