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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_1165KEGG: bca:BCE0950 hypothetical protein. (280 aa)    
Predicted Functional Partners:
Swol_1167
Hypothetical protein; KEGG: bsu:BG13036 similar to hypothetical proteins from B. subtilis.
 
     0.953
Swol_1175
Hypothetical protein.
 
     0.781
Swol_1415
KEGG: bcz:pE33L466_0121 hypothetical protein.
  
     0.746
Swol_0074
KEGG: dsy:DSY4478 hypothetical protein.
  
     0.744
Swol_0079
Hypothetical protein; KEGG: mta:Moth_2041 spore germination protein.
  
     0.739
Swol_2437
Hypothetical protein.
  
     0.613
Swol_1662
KEGG: cpe:CPE0249 hypothetical protein.
  
     0.606
Swol_0458
KEGG: pfa:PF10_0351 hypothetical protein.
  
     0.605
Swol_0120
KEGG: bcz:BCZK0794 hypothetical protein.
  
     0.584
Swol_2018
Putative transmembrane anti-sigma factor.
  
     0.555
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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