Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Swol_0074 | Swol_0079 | KEGG: dsy:DSY4478 hypothetical protein. | Hypothetical protein; KEGG: mta:Moth_2041 spore germination protein. | 0.774 |
Swol_0074 | Swol_0120 | KEGG: dsy:DSY4478 hypothetical protein. | KEGG: bcz:BCZK0794 hypothetical protein. | 0.556 |
Swol_0074 | Swol_1167 | KEGG: dsy:DSY4478 hypothetical protein. | Hypothetical protein; KEGG: bsu:BG13036 similar to hypothetical proteins from B. subtilis. | 0.720 |
Swol_0074 | Swol_1168 | KEGG: dsy:DSY4478 hypothetical protein. | YheD; KEGG: bld:BLi01055 YheD. | 0.727 |
Swol_0074 | Swol_1175 | KEGG: dsy:DSY4478 hypothetical protein. | Hypothetical protein. | 0.624 |
Swol_0074 | Swol_1202 | KEGG: dsy:DSY4478 hypothetical protein. | Hypothetical protein; KEGG: cac:CAC3587 DNA replication protein DnaD. | 0.519 |
Swol_0074 | Swol_1415 | KEGG: dsy:DSY4478 hypothetical protein. | KEGG: bcz:pE33L466_0121 hypothetical protein. | 0.722 |
Swol_0074 | Swol_2437 | KEGG: dsy:DSY4478 hypothetical protein. | Hypothetical protein. | 0.645 |
Swol_0079 | Swol_0074 | Hypothetical protein; KEGG: mta:Moth_2041 spore germination protein. | KEGG: dsy:DSY4478 hypothetical protein. | 0.774 |
Swol_0079 | Swol_0120 | Hypothetical protein; KEGG: mta:Moth_2041 spore germination protein. | KEGG: bcz:BCZK0794 hypothetical protein. | 0.659 |
Swol_0079 | Swol_1167 | Hypothetical protein; KEGG: mta:Moth_2041 spore germination protein. | Hypothetical protein; KEGG: bsu:BG13036 similar to hypothetical proteins from B. subtilis. | 0.678 |
Swol_0079 | Swol_1168 | Hypothetical protein; KEGG: mta:Moth_2041 spore germination protein. | YheD; KEGG: bld:BLi01055 YheD. | 0.719 |
Swol_0079 | Swol_1175 | Hypothetical protein; KEGG: mta:Moth_2041 spore germination protein. | Hypothetical protein. | 0.632 |
Swol_0079 | Swol_1202 | Hypothetical protein; KEGG: mta:Moth_2041 spore germination protein. | Hypothetical protein; KEGG: cac:CAC3587 DNA replication protein DnaD. | 0.693 |
Swol_0079 | Swol_1415 | Hypothetical protein; KEGG: mta:Moth_2041 spore germination protein. | KEGG: bcz:pE33L466_0121 hypothetical protein. | 0.711 |
Swol_0079 | Swol_1662 | Hypothetical protein; KEGG: mta:Moth_2041 spore germination protein. | KEGG: cpe:CPE0249 hypothetical protein. | 0.552 |
Swol_0079 | Swol_2437 | Hypothetical protein; KEGG: mta:Moth_2041 spore germination protein. | Hypothetical protein. | 0.450 |
Swol_0120 | Swol_0074 | KEGG: bcz:BCZK0794 hypothetical protein. | KEGG: dsy:DSY4478 hypothetical protein. | 0.556 |
Swol_0120 | Swol_0079 | KEGG: bcz:BCZK0794 hypothetical protein. | Hypothetical protein; KEGG: mta:Moth_2041 spore germination protein. | 0.659 |
Swol_0120 | Swol_1167 | KEGG: bcz:BCZK0794 hypothetical protein. | Hypothetical protein; KEGG: bsu:BG13036 similar to hypothetical proteins from B. subtilis. | 0.427 |
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