STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_1182KEGG: spb:M28_Spy0445 ParE-domain protein. (62 aa)    
Predicted Functional Partners:
Swol_1183
KEGG: dsy:DSY2307 hypothetical protein.
 
 
   0.958
Swol_0150
KEGG: dsy:DSY2307 hypothetical protein.
 
 
   0.820
Swol_0577
Hypothetical protein.
  
     0.733
Swol_1074
KEGG: spn:SP0275 putative DNA-damage-inducibile protein.
 
 
   0.649
Swol_0393
KEGG: dsy:DSY0933 hypothetical protein.
 
 
   0.623
Swol_0576
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
     0.614
Swol_1410
Hypothetical protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
     0.561
Swol_1972
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
     0.488
Swol_0495
Hypothetical protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
     0.480
Swol_2224
KEGG: bca:BCE0996 hypothetical protein.
  
     0.472
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.