STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_1186KEGG: tma:TM0962 hypothetical protein. (258 aa)    
Predicted Functional Partners:
Swol_1185
KEGG: tma:TM0961 lemA protein.
 
  
 0.923
Swol_1353
Oxidoreductase; KEGG: ctc:CTC00417 oxidoreductase.
  
   0.834
flhB
Flagellar biosynthesis/type III secretory pathway protein; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.
    
 
 0.699
fliQ
Conserved hypothetical protein; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.
    
 
 0.692
Swol_0867
Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.
    
 
 0.692
Swol_0849
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
    
   0.674
Swol_0894
KEGG: chy:CHY_1773 MgtC family protein.
 
      0.607
Swol_2185
KEGG: aba:Acid345_1827 hypothetical protein.
  
  
 0.604
Swol_0860
Flagellar protein (FliL)-like protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
    
 
 0.554
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.