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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_1213Hypothetical protein. (413 aa)    
Predicted Functional Partners:
Swol_1212
RNA polymerase, sigma-24 subunit, ECF subfamily; KEGG: sth:STH845 RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.895
Swol_0132
RNA polymerase, sigma-24 subunit, ECF subfamily; KEGG: mta:Moth_2362 sigma-24 (FecI-like); Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.542
Swol_1791
RNA polymerase, sigma-24 subunit, ECF subfamily; KEGG: cac:CAC1509 specialized sigma subunit of RNA polymerase; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.542
Swol_2019
RNA polymerase, sigma-24 subunit, ECF subfamily; KEGG: sth:STH845 RNA polymerase ECF-type sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.542
Swol_2058
RNA polymerase, sigma-24 subunit, ECF subfamily; KEGG: cac:CAC1509 specialized sigma subunit of RNA polymerase; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.542
Swol_0087
KEGG: mta:Moth_0090 sigma-24 (FecI-like).
  
 
 0.539
Swol_2351
RNA polymerase, sigma-24 subunit, ECF subfamily; KEGG: dsy:DSY0451 hypothetical protein; Belongs to the sigma-70 factor family.
  
 
 0.539
Swol_2523
RNA polymerase, sigma-24 subunit, ECF subfamily.
  
 
 0.539
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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