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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_1241KEGG: btk:BT9727_1208 poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. (363 aa)    
Predicted Functional Partners:
Swol_1242
KEGG: tte:TTE0551 predicted acyl dehydratase.
 
 
 0.976
Swol_1145
KEGG: bja:bll4548 hypothetical protein.
  
  
 
0.925
Swol_1355
KEGG: tte:TTE0551 predicted acyl dehydratase.
 
 
 0.925
Swol_1356
KEGG: ctc:CTC00706 (de)hydratase mit MaoC domain.
 
 
 0.925
Swol_1099
KEGG: btk:BT9727_1208 poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit.
  
  
 
0.903
Swol_1243
Hypothetical protein; KEGG: btk:BT9727_1206 PHA synthase subunit PhaR; regulator of PhaP.
  
  
 0.695
Swol_1244
Hypothetical protein; KEGG: sru:SRU_2684 PhaF, putative.
     
 0.450
Swol_1240
KEGG: dsy:DSY2749 hypothetical protein.
       0.419
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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