STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_1249Thermostable dipeptidase. Metallo peptidase. MEROPS family M19; KEGG: tte:TTE2129 Zn-dependent dipeptidase, microsomal dipeptidase homolog. (311 aa)    
Predicted Functional Partners:
Swol_1878
KEGG: dsy:DSY4015 hypothetical protein.
     0.924
Swol_1248
KEGG: tte:TTE1369 predicted metal-dependent phosphoesterases (PHP family).
       0.823
Swol_1250
KEGG: bsu:BG11245 stage V sporulation protein S.
       0.656
Swol_1247
KEGG: chy:CHY_0674 putative cell-wall associated endopeptidase.
       0.583
Swol_1872
KEGG: dsy:DSY3978 hypothetical protein.
 
     0.525
Swol_1246
Hypothetical protein.
       0.439
Swol_0291
KEGG: cac:CAC2808 beta-lactamase class C domain (PBPX family) containing protein.
 
    0.418
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.