STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_1259KEGG: mta:Moth_1076 hypothetical protein. (180 aa)    
Predicted Functional Partners:
Swol_1258
Vesicle-fusing ATPase; KEGG: tte:TTE0122 ATP-dependent Zn proteases; Belongs to the AAA ATPase family.
 
     0.899
Swol_1444
KEGG: mta:Moth_0580 hypothetical protein.
  
     0.737
Swol_0557
Hypothetical protein; KEGG: tte:TTE1290 stage III sporulation protein AH.
  
     0.718
Swol_1340
KEGG: mta:Moth_1327 protein of unknown function DUF1614.
  
     0.709
Swol_0127
Hypothetical protein; KEGG: mta:Moth_1253 O-antigen polymerase.
  
     0.665
Swol_0625
KEGG: mta:Moth_1493 protein of unknown function DUF1458.
  
     0.665
Swol_1260
Hypothetical protein; KEGG: btk:BT9727_0789 possible S-layer protein.
 
     0.659
Swol_0111
KEGG: chy:CHY_2368 hypothetical protein.
  
     0.625
Swol_1339
KEGG: chy:CHY_1923 putative stage II sporulation protein P.
  
     0.615
Swol_0131
KEGG: mta:Moth_2363 putative transmembrane transcriptional regulator (anti-sigma factor).
  
     0.608
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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