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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_1290KEGG: mta:Moth_0905 accessory gene regulator B. (212 aa)    
Predicted Functional Partners:
Swol_2401
KEGG: mta:Moth_1579 signal transduction histidine kinase regulating citrate/malate metabolism.
 
  
  0.941
Swol_1918
PAS/PAC sensor signal transduction histidine kinase; KEGG: dsy:DSY4114 hypothetical protein.
  
  
 0.724
Swol_2470
KEGG: mta:Moth_2418 hypothetical protein.
  
     0.557
Swol_1087
KEGG: mta:Moth_1761 hypothetical protein.
  
     0.530
Swol_0320
KEGG: dsy:DSY2102 hypothetical protein.
  
     0.501
Swol_1337
Hypothetical protein.
  
     0.489
Swol_2537
KEGG: cac:CAC3720 hypothetical protein.
  
     0.476
Swol_0547
KEGG: mta:Moth_1537 hypothetical protein.
  
     0.454
Swol_1133
KEGG: mta:Moth_1152 hypothetical protein.
  
     0.441
Swol_1762
KEGG: ctc:CTC01845 hypothetical protein.
  
   
 0.435
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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