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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_1292Zn-dependent hydrolases including glyoxylases-like protein; KEGG: gme:Gmet_2200 hypothetical protein. (293 aa)    
Predicted Functional Partners:
Swol_1480
Zn-dependent hydrolases including glyoxylases-like protein; KEGG: gme:Gmet_2200 hypothetical protein.
  
  
 
0.906
Swol_1202
Hypothetical protein; KEGG: cac:CAC3587 DNA replication protein DnaD.
  
    0.713
Swol_0441
KEGG: chy:CHY_1645 hypothetical protein.
 
     0.706
Swol_1201
KEGG: tte:TTE2774 replicative DNA helicase.
 
   
 0.666
Swol_0191
Hypothetical protein.
  
     0.655
Swol_0460
KEGG: dsy:DSY3269 hypothetical protein.
  
     0.537
Swol_2165
KEGG: tte:TTE0834 hypothetical protein.
  
     0.525
Swol_1416
KEGG: ath:At5g03560 expressed protein.
 
     0.521
Swol_1902
KEGG: gme:Gmet_1148 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
  
 0.512
Swol_1434
KEGG: mta:Moth_1703 hypothetical protein.
  
     0.510
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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