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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_1297KEGG: dsy:DSY2810 hypothetical protein. (97 aa)    
Predicted Functional Partners:
Swol_1298
KEGG: tel:tsl2232 hypothetical protein.
 
  
 0.953
Swol_1103
KEGG: efa:EF2534 hypothetical protein.
  
  
  0.849
Swol_1729
KEGG: mba:Mbar_A2482 hypothetical protein.
  
  
  0.849
Swol_0638
KEGG: mac:MA0102 nucleotidyltransferase.
 
  
 0.805
Swol_0548
KEGG: chy:CHY_2536 nucleotidyltransferase family protein.
 
  
 0.803
Swol_1102
KEGG: mja:MJ0435 hypothetical protein.
 
  
 0.654
Swol_1728
KEGG: mja:MJ0435 hypothetical protein.
 
  
 0.551
Swol_0604
KEGG: dsy:DSY2773 hypothetical protein.
  
  
 
0.499
Swol_0549
KEGG: chy:CHY_2535 hypothetical protein.
  
  
 
0.446
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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