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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_1334Putative transcriptional regulator, TetR family; KEGG: dsy:DSY3379 hypothetical protein. (241 aa)    
Predicted Functional Partners:
Swol_1333
KEGG: mta:Moth_0803 response regulator receiver domain protein (CheY-like).
     
 0.618
Swol_0601
KEGG: cyb:CYB_0507 sensory box histidine kinase/response regulator.
  
 
 0.612
Swol_1040
Signal transduction histidine kinase regulating C4-dicarboxylate transport system-like protein; KEGG: wsu:WS1436 putative two-component sensor.
  
 
 
 0.557
Swol_2063
KEGG: bca:BCE5566 hypothetical protein.
  
     0.510
Swol_2022
Hypothetical protein.
  
  
 0.492
Swol_2188
Hypothetical protein.
  
     0.488
Swol_1084
Non-ribosomal peptide synthetase modules and related proteins-like protein; KEGG: bld:BLi00402 lichenysin synthetase B; Belongs to the ATP-dependent AMP-binding enzyme family.
 
   
 0.476
Swol_0945
KEGG: ddi:DDB0204067 hypothetical protein.
  
   
 0.466
Swol_2440
KEGG: ade:Adeh_3520 heat repeat protein.
  
     0.458
Swol_2056
KEGG: cpv:cgd6_3110 hypothetical protein.
  
  
 0.439
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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