STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_1336KEGG: mta:Moth_1325 hypothetical protein. (183 aa)    
Predicted Functional Partners:
Swol_1340
KEGG: mta:Moth_1327 protein of unknown function DUF1614.
 
     0.877
Swol_1339
KEGG: chy:CHY_1923 putative stage II sporulation protein P.
 
     0.839
Swol_1335
Hypothetical protein.
       0.799
Swol_1337
Hypothetical protein.
 
     0.797
Swol_1338
KEGG: gka:GK2223 hypothetical protein.
 
     0.768
Swol_0249
KEGG: chy:CHY_0171 hypothetical protein.
  
     0.723
Swol_0931
KEGG: tte:TTE1683 hypothetical protein.
  
     0.679
Swol_0034
KEGG: mta:Moth_0031 SigmaK-factor processing regulatory BofA.
  
     0.655
Swol_2470
KEGG: mta:Moth_2418 hypothetical protein.
  
     0.638
Swol_0963
KEGG: tte:TTE1573 hypothetical protein.
  
     0.633
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.