STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_1355KEGG: tte:TTE0551 predicted acyl dehydratase. (142 aa)    
Predicted Functional Partners:
Swol_1356
KEGG: ctc:CTC00706 (de)hydratase mit MaoC domain.
 
  
 
0.954
Swol_0650
KEGG: ctc:CTC02427 putative crotonase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.934
Swol_0790
KEGG: tte:TTE0544 Enoyl-CoA hydratase/carnithine racemase.
  
 0.934
Swol_1484
Short chain enoyl-CoA hydratase; KEGG: cpe:CPE2301 3-hydroxybutyryl-CoA dehydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.934
Swol_1936
Short chain enoyl-CoA hydratase; Involved in syntrophic growth of S.wolfei with butyrate, as part of the butyrate oxidation pathway. Probably catalyzes the hydration of crotonyl-CoA to 3-hydroxybutyryl-CoA.
  
 0.934
Swol_2031
Short chain enoyl-CoA hydratase; KEGG: cpe:CPE2301 3-hydroxybutyryl-CoA dehydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.934
Swol_2566
KEGG: fnu:FN1020 3-hydroxybutyryl-CoA dehydratase.
  
 0.934
Swol_1145
KEGG: bja:bll4548 hypothetical protein.
 
 
 0.927
Swol_1099
KEGG: btk:BT9727_1208 poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit.
 
 
 0.926
Swol_1241
KEGG: btk:BT9727_1208 poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit.
 
 
 0.925
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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