STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_1373Precorrin-6B methylase 2-like protein; KEGG: gme:Gmet_0481 precorrin-6y C5,15-methyltransferase, subunit CbiE. (302 aa)    
Predicted Functional Partners:
Swol_0687
uroporphyrinogen-III synthase / uroporphyrinogen-III C-methyltransferase; KEGG: dsy:DSY2224 hypothetical protein.
  
  
 0.712
Swol_1376
Pyruvate ferredoxin oxidoreductase, delta subunit; KEGG: ctc:CTC02527 pyruvate synthase subunit porD.
 
     0.692
Swol_2056
KEGG: cpv:cgd6_3110 hypothetical protein.
  
     0.679
Swol_1377
Pyruvate ferredoxin oxidoreductase, gamma subunit; KEGG: ctc:CTC02528 pyruvate synthase subunit porC.
 
     0.675
Swol_1375
Pyruvate ferredoxin oxidoreductase, alpha subunit; KEGG: ctc:CTC02526 pyruvate synthase subunit porA.
 
     0.673
Swol_1374
KEGG: ctc:CTC02525 pyruvate synthase subunit porB.
 
     0.670
Swol_1260
Hypothetical protein; KEGG: btk:BT9727_0789 possible S-layer protein.
  
    0.644
Swol_2022
Hypothetical protein.
  
     0.639
Swol_1080
KEGG: rme:Rmet_5436 ATP-dependent transcriptional regulator, MalT-like, LuxR family.
  
     0.609
Swol_0165
FOG: WD40-like repeat protein; KEGG: mac:MA4287 cell surface protein.
  
     0.608
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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