STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_1380KEGG: dsy:DSY0955 hypothetical protein. (598 aa)    
Predicted Functional Partners:
Swol_0570
KEGG: dsy:DSY1011 hypothetical protein.
  
     0.758
Swol_0676
KEGG: dsy:DSY2235 hypothetical protein; Belongs to the FPP/GGPP synthase family.
  
   
 0.578
Swol_1252
KEGG: mta:Moth_1082 hypothetical protein.
  
     0.567
Swol_2259
KEGG: ctc:CTC00532 hypothetical protein.
 
     0.556
Swol_1003
KEGG: cac:CAC2776 hypothetical protein.
  
   
 0.549
Swol_1734
KEGG: sat:SYN_00202 hypothetical protein.
  
     0.545
Swol_0601
KEGG: cyb:CYB_0507 sensory box histidine kinase/response regulator.
  
  
 0.495
Swol_2536
KEGG: dsy:DSY5032 hypothetical protein.
  
     0.462
Swol_2248
KEGG: plt:Plut_1806 hypothetical protein.
 
     0.447
Swol_0298
KEGG: mta:Moth_0188 hypothetical protein.
 
   
 0.443
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.