STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_1391KEGG: cac:CAC0600 predicted membrane protein. (378 aa)    
Predicted Functional Partners:
Swol_1390
KEGG: cac:CAC0599 transcriptional regulator, GntR family.
 
   
 0.897
Swol_2188
Hypothetical protein.
  
     0.726
Swol_0458
KEGG: pfa:PF10_0351 hypothetical protein.
  
     0.719
Swol_0163
Hypothetical protein; KEGG: mta:Moth_0241 glycosyl hydrolase, BNR repeat.
  
     0.714
Swol_1940
KEGG: bld:BLi00859 hypothetical protein.
  
     0.706
Swol_2022
Hypothetical protein.
  
     0.705
Swol_2440
KEGG: ade:Adeh_3520 heat repeat protein.
  
     0.702
Swol_2056
KEGG: cpv:cgd6_3110 hypothetical protein.
  
     0.699
Swol_0165
FOG: WD40-like repeat protein; KEGG: mac:MA4287 cell surface protein.
  
     0.696
Swol_2063
KEGG: bca:BCE5566 hypothetical protein.
  
     0.693
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.