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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_1393KEGG: mth:MTH1811 N-carbamoyl-D-amino acid amidohydrolase. (283 aa)    
Predicted Functional Partners:
Swol_2170
KEGG: sat:SYN_01242 glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 
 0.934
Swol_2093
Aminotransferase; KEGG: pca:Pcar_1888 aspartate aminotransferase.
  
 
 0.923
Swol_0105
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
    
 0.918
Swol_0378
KEGG: bcl:ABC2714 isocitrate dehydrogenase.
  
 
  0.879
Swol_0519
Pyruvate carboxylase, PYKA; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
     
 0.815
Swol_0037
KEGG: chy:CHY_0044 putative keto/oxoacid ferredoxin oxidoreductase, beta subunit.
   
 
  0.805
Swol_1399
KEGG: chy:CHY_0576 putative keto/oxoacid ferredoxin oxidoreductase, beta subunit.
   
 
  0.805
Swol_0036
KEGG: chy:CHY_0043 putative keto/oxoacid ferredoxin oxidoreductase, alpha subunit.
   
 
  0.803
Swol_0038
KEGG: chy:CHY_0045 putative keto/oxoacid ferredoxin oxidoreductase, gamma subunit.
   
 
  0.803
Swol_1398
KEGG: sth:STH224 2-oxoglutarate oxidoreductase gamma subunit.
   
 
  0.803
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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