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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_1400KEGG: tma:TM1759 2-oxoisovalerate ferredoxin oxidoreductase, alpha subunit. (352 aa)    
Predicted Functional Partners:
Swol_1399
KEGG: chy:CHY_0576 putative keto/oxoacid ferredoxin oxidoreductase, beta subunit.
 
 0.999
Swol_1398
KEGG: sth:STH224 2-oxoglutarate oxidoreductase gamma subunit.
 
 0.997
Swol_0037
KEGG: chy:CHY_0044 putative keto/oxoacid ferredoxin oxidoreductase, beta subunit.
 
 0.996
Swol_1401
KEGG: aba:Acid345_1811 4Fe-4S ferredoxin, iron-sulfur binding.
 
  
  0.994
Swol_0038
KEGG: chy:CHY_0045 putative keto/oxoacid ferredoxin oxidoreductase, gamma subunit.
 
 0.989
Swol_1374
KEGG: ctc:CTC02525 pyruvate synthase subunit porB.
  
 0.934
Swol_2234
KEGG: pai:PAE3274 2-ketoacid ferredoxin oxidoreductase beta subunit.
  
 0.934
Swol_2040
KEGG: tte:TTE1815 pyruvate kinase; Belongs to the pyruvate kinase family.
  
 
 0.930
Swol_0558
KEGG: chy:CHY_1999 oxaloacetate decarboxylase, alpha subunit.
    
 0.926
Swol_0036
KEGG: chy:CHY_0043 putative keto/oxoacid ferredoxin oxidoreductase, alpha subunit.
  
  
 
0.921
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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