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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_1412KEGG: mta:Moth_1355 nucleoside recognition. (178 aa)    
Predicted Functional Partners:
Swol_1413
KEGG: mta:Moth_1356 nucleoside recognition.
  
 0.999
Swol_0764
KEGG: btk:BT9727_3670 hypothetical protein.
 
  
 0.636
Swol_0605
Uncharacterized membrane protein; KEGG: mta:Moth_1503 required for dissolution of the septal cell wall; RBL05740.
  
  
 0.618
Swol_1415
KEGG: bcz:pE33L466_0121 hypothetical protein.
       0.614
Swol_0550
KEGG: tte:TTE1283 stage III sporulation protein spoIIIAA.
  
  
 0.573
Swol_1414
KEGG: mta:Moth_1358 hypothetical protein.
       0.562
Swol_0909
KEGG: mta:Moth_1058 serine-type D-Ala-D-Ala carboxypeptidase; Belongs to the peptidase S11 family.
  
  
 0.550
Swol_1419
Peptidase M50; KEGG: mta:Moth_1362 peptidase M50.
  
  
 0.518
Swol_1420
KEGG: gsu:GSU1581 polyA polymerase family protein; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
       0.512
Swol_1322
Conserved hypothetical protein; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
  
   
 0.506
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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