STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_1414KEGG: mta:Moth_1358 hypothetical protein. (136 aa)    
Predicted Functional Partners:
Swol_1415
KEGG: bcz:pE33L466_0121 hypothetical protein.
 
    0.892
Swol_0764
KEGG: btk:BT9727_3670 hypothetical protein.
  
    0.731
GrkA
grkA; KEGG: grkA; spore germination protein, GrkA.
  
     0.723
Swol_0931
KEGG: tte:TTE1683 hypothetical protein.
  
   
 0.719
Swol_0078
KEGG: tte:TTE2379 germination protein.
  
     0.717
Swol_0063
KEGG: tte:TTE2552 pro-sigma-E processing factor spoIIR.
  
     0.702
Swol_0948
Conserved hypothetical protein; KEGG: mta:Moth_0855 PRC-barrel.
  
  
 0.702
Swol_0077
KEGG: dsy:DSY4477 hypothetical protein.
  
     0.689
Swol_0589
SpoIVB peptidase. Serine peptidase. MEROPS family S55; KEGG: dsy:DSY2342 hypothetical protein.
  
    0.675
Swol_0321
KEGG: tte:TTE0476 hypothetical protein.
  
     0.674
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.