STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_1415KEGG: bcz:pE33L466_0121 hypothetical protein. (225 aa)    
Predicted Functional Partners:
Swol_1414
KEGG: mta:Moth_1358 hypothetical protein.
 
    0.892
Swol_1165
KEGG: bca:BCE0950 hypothetical protein.
  
     0.746
Swol_2187
KEGG: cac:CAC2776 hypothetical protein.
  
    0.740
Swol_0458
KEGG: pfa:PF10_0351 hypothetical protein.
  
    0.728
Swol_1961
Hypothetical protein.
  
     0.723
Swol_0074
KEGG: dsy:DSY4478 hypothetical protein.
  
    0.722
Swol_1174
KEGG: bce:BC0877 IG hypothetical 16724.
  
     0.722
Swol_1168
YheD; KEGG: bld:BLi01055 YheD.
  
     0.719
Swol_2188
Hypothetical protein.
  
     0.716
Swol_1940
KEGG: bld:BLi00859 hypothetical protein.
  
     0.714
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.