STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_1484Short chain enoyl-CoA hydratase; KEGG: cpe:CPE2301 3-hydroxybutyryl-CoA dehydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (260 aa)    
Predicted Functional Partners:
Swol_1485
KEGG: chy:CHY_1603 3-hydroxybutyryl-CoA dehydrogenase.
 
 0.990
Swol_0307
KEGG: ctc:CTC02423 3-hydroxybutyryl-CoA dehydrogenase.
 
 0.973
Swol_0435
KEGG: chy:CHY_1603 3-hydroxybutyryl-CoA dehydrogenase.
 
 0.973
Swol_0791
KEGG: ctc:CTC02423 3-hydroxybutyryl-CoA dehydrogenase.
 
 0.973
Swol_1171
KEGG: tte:TTE0548 3-Hydroxyacyl-CoA dehydrogenase.
 
 0.973
Swol_1935
3-hydroxyacyl-CoA dehydrogenase; Involved in syntrophic growth of S.wolfei with butyrate, as part of the butyrate oxidation pathway. Probably catalyzes the oxidation of 3-hydroxybutyryl-CoA to acetoacetyl-CoA. Belongs to the 3-hydroxyacyl-CoA dehydrogenase family.
 
 0.973
Swol_2030
KEGG: cac:CAC2708 3-hydroxybutyryl-CoA dehydrogenase.
 
 0.973
Swol_1486
Acetyl-CoA C-acetyltransferase; KEGG: dsy:DSY1567 hypothetical protein; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.952
Swol_1483
butyryl-CoA dehydrogenase; KEGG: dsy:DSY1568 hypothetical protein.
  
 0.938
Swol_1242
KEGG: tte:TTE0551 predicted acyl dehydratase.
  
 0.934
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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