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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_1520ResB protein required for cytochrome c biosynthesis-like protein; KEGG: mta:Moth_2199 ResB-like. (342 aa)    
Predicted Functional Partners:
Swol_1519
KEGG: mta:Moth_2200 cytochrome c assembly protein.
 
  
 0.987
Swol_1521
KEGG: sth:STH729 cytochrome C nitrite reductase catalytic subunit; Belongs to the cytochrome c-552 family.
 
  
 0.782
Swol_0687
uroporphyrinogen-III synthase / uroporphyrinogen-III C-methyltransferase; KEGG: dsy:DSY2224 hypothetical protein.
  
    0.779
Swol_1522
Respiratory nitrite reductase specific menaquinol--cytochrome-c reductase (NrfH) precursor; KEGG: dsy:DSY2471 cytochrome c nitrite reductase small subunit NrfH.
  
  
 0.695
atpB
ATP synthase F0, A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane.
 
  
 0.471
atpA
Sodium-transporting two-sector ATPase; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family.
  
  
 0.405
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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