STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_1544KEGG: sat:SYN_02742 hypothetical cytosolic protein. (327 aa)    
Predicted Functional Partners:
Swol_1543
Putative transcriptional regulator, XRE family; KEGG: ctc:CTC00922 putative transcriptional regulator.
 
     0.671
Swol_2217
KEGG: dsy:DSY0837 hypothetical protein.
  
     0.625
Swol_2220
KEGG: bfr:BF4241 IS21 family transposase.
  
     0.536
Swol_2009
KEGG: ttj:TTHA1016 hypothetical protein.
  
     0.493
Swol_0748
KEGG: mta:Moth_0181 hypothetical protein.
  
     0.475
Swol_2010
KEGG: ttj:TTHA1020 hypothetical protein.
  
     0.466
Swol_2075
KEGG: ttj:TTHA1020 hypothetical protein.
  
     0.449
Swol_2007
ATPase (AAA+ superfamily)-like protein; KEGG: ttj:TTHA1014 hypothetical protein.
  
     0.443
Swol_1545
KEGG: aci:ACIAD3288 putative partition-related protein.
       0.407
Swol_0286
KEGG: gka:GK2354 hypothetical protein.
  
     0.402
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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