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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_1551KEGG: cch:Cag_1129 hypothetical protein. (67 aa)    
Predicted Functional Partners:
Swol_0165
FOG: WD40-like repeat protein; KEGG: mac:MA4287 cell surface protein.
  
     0.554
Swol_1552
Hypothetical protein.
       0.519
Swol_1550
KEGG: dde:Dde_1748 DEAD/DEAH box helicase-like.
       0.465
Swol_1548
KEGG: noc:Noc_2928 site-specific DNA-methyltransferase (adenine-specific).
       0.461
Swol_1549
KEGG: dde:Dde_1747 hypothetical protein.
       0.461
Swol_2188
Hypothetical protein.
  
     0.458
Swol_0163
Hypothetical protein; KEGG: mta:Moth_0241 glycosyl hydrolase, BNR repeat.
  
     0.457
Swol_1546
Hypothetical protein.
       0.447
Swol_1547
KEGG: cte:CT0911 type III restriction system endonuclease.
       0.447
Swol_2056
KEGG: cpv:cgd6_3110 hypothetical protein.
  
     0.444
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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