STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_1570KEGG: noc:Noc_1461 PilT-like protein. (142 aa)    
Predicted Functional Partners:
Swol_1571
KEGG: noc:Noc_1462 hypothetical protein.
       0.789
Swol_2505
KEGG: xfa:XF2030 hypothetical protein.
  
     0.623
Swol_1528
KEGG: dsy:DSY2029 hypothetical protein.
  
     0.500
Swol_0750
KEGG: chy:CHY_2514 hypothetical protein.
  
     0.479
Swol_1625
KEGG: dsy:DSY3489 hypothetical protein.
  
     0.461
Swol_1572
KEGG: tte:TTE0963 diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase.
       0.454
Swol_2466
KEGG: dsy:DSY3642 hypothetical protein.
 
     0.454
Swol_2490
KEGG: tde:TDE0158 hypothetical protein.
  
     0.437
Swol_1551
KEGG: cch:Cag_1129 hypothetical protein.
  
     0.434
Swol_2037
KEGG: dsy:DSY0920 hypothetical protein.
  
     0.420
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.