STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_1663ErfK/YbiS/YcfS/YnhG; KEGG: mta:Moth_0101 ErfK/YbiS/YcfS/YnhG. (283 aa)    
Predicted Functional Partners:
Swol_1247
KEGG: chy:CHY_0674 putative cell-wall associated endopeptidase.
  
  
 0.660
Swol_0126
KEGG: mta:Moth_0517 N-acetylmuramoyl-L-alanine amidase.
  
  
 0.560
Swol_1662
KEGG: cpe:CPE0249 hypothetical protein.
     
 0.480
Swol_1350
KEGG: tte:TTE2785 UDP-N-acetylmuramyl tripeptide synthase; Belongs to the MurCDEF family.
  
  
 0.460
Swol_0601
KEGG: cyb:CYB_0507 sensory box histidine kinase/response regulator.
  
  
 0.440
Swol_0820
Peptidoglycan glycosyltransferase; KEGG: mta:Moth_0837 stage V sporulation protein D.
      
 0.408
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.