STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_1700KEGG: sat:SYN_00151 2Fe-2S iron-sulfur cluster domain with dehydrogenase. (247 aa)    
Predicted Functional Partners:
Swol_0657
NADH dehydrogenase (quinone); KEGG: tko:TK1613 NADH:ubiquinone oxidoreductase, NADH-binding subunit F.
 
 0.998
Swol_1018
NADH dehydrogenase (quinone); KEGG: chy:CHY_0732 Fe-hydrogenase, beta subunit.
 
 0.996
Swol_1024
NADH dehydrogenase (quinone); KEGG: tte:TTE0893 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit.
 
 0.996
Swol_1828
NADH dehydrogenase (quinone); KEGG: chy:CHY_0732 Fe-hydrogenase, beta subunit.
 
 0.996
Swol_1701
NADH dehydrogenase (quinone); KEGG: det:DET0729 [Fe] hydrogenase, HymB subunit, putative.
 
 0.995
Swol_0656
NADH:ubiquinone oxidoreductase 24 kD subunit-like protein; KEGG: tko:TK1614 NADH:ubiquinone oxidoreductase, subunit E.
 0.993
Swol_1702
KEGG: sat:SYN_00153 NADH:ubiquinone oxidoreductase 24 kD subunit NuoE.
 0.984
Swol_1440
Ferridoxin; KEGG: sat:SYN_00800 ferridoxin.
  
 0.969
Swol_0784
NADH dehydrogenase (quinone); KEGG: chy:CHY_0732 Fe-hydrogenase, beta subunit.
 
 0.962
Swol_1019
KEGG: chy:CHY_0731 Fe-hydrogenase, gamma subunit.
 0.936
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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