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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_1715ATPase; KEGG: plt:Plut_1125 ATPase. (236 aa)    
Predicted Functional Partners:
Swol_2458
KEGG: dsy:DSY3824 hypothetical protein.
 
 0.983
Swol_1714
KEGG: dsy:DSY4806 hypothetical protein.
 
  
 0.962
Swol_0943
KEGG: blo:BL1133 protein with weak similarity to components of ABC transporter.
 
 0.924
Swol_1713
Multidrug resistance efflux pump-like protein; KEGG: dsy:DSY3826 hypothetical protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.922
Swol_1734
KEGG: sat:SYN_00202 hypothetical protein.
   
 
 0.721
Swol_2038
KEGG: ctc:CTC00240 ABC transporter ATP-binding protein.
  
0.672
Swol_0175
KEGG: dsy:DSY3360 hypothetical protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.617
Swol_0134
Hypothetical protein; KEGG: mta:Moth_2342 outer membrane protein-like.
 
 
 0.512
Swol_2229
KEGG: dsy:DSY0172 hypothetical protein.
  
 
 0.503
rpsE
SSU ribosomal protein S5P; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family.
  
   
 0.471
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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