STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_1738KEGG: oih:OB2942 ABC transporter substrate-binding protein. (340 aa)    
Predicted Functional Partners:
Swol_1736
KEGG: pfo:Pfl_0363 binding-protein-dependent transport systems inner membrane component.
 
 0.999
Swol_1737
KEGG: sma:SAV3432 putative glycine betaine ABC transporter ATP-binding protein.
 
 0.999
purN
Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.
   
    0.470
Swol_2481
KEGG: tde:TDE0375 ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
    
 0.429
Swol_0315
KEGG: bbr:BB2796 putative ABC transporter permease protein.
     
 0.400
Swol_1071
KEGG: dsy:DSY4874 hypothetical protein.
     
 0.400
Swol_1739
KEGG: plt:Plut_1037 amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine.
     
 0.400
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.