STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_1742KEGG: mta:Moth_0243 hypothetical protein. (504 aa)    
Predicted Functional Partners:
Swol_1743
KEGG: mba:Mbar_A3737 hypothetical protein.
 
     0.861
Swol_0139
Hypothetical protein; KEGG: mta:Moth_2343 copper amine oxidase-like.
 
     0.778
Swol_1184
KEGG: mta:Moth_0243 hypothetical protein.
  
     0.774
Swol_0140
KEGG: sth:STH2256 hypothetical protein.
  
     0.773
Swol_0298
KEGG: mta:Moth_0188 hypothetical protein.
  
     0.772
Swol_1043
Hypothetical protein; KEGG: mta:Moth_1459 Ig-like, group 2.
  
     0.772
Swol_1988
KEGG: sth:STH2256 hypothetical protein.
 
     0.771
Swol_0133
Hypothetical protein; KEGG: mta:Moth_2343 copper amine oxidase-like.
 
     0.725
Swol_0131
KEGG: mta:Moth_2363 putative transmembrane transcriptional regulator (anti-sigma factor).
  
     0.724
Swol_0127
Hypothetical protein; KEGG: mta:Moth_1253 O-antigen polymerase.
  
     0.722
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.