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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_1759KEGG: gka:GK0857 hypothetical protein. (51 aa)    
Predicted Functional Partners:
Swol_0120
KEGG: bcz:BCZK0794 hypothetical protein.
  
     0.506
Swol_0075
KEGG: dsy:DSY2110 hypothetical protein.
 
  
 0.489
Swol_0077
KEGG: dsy:DSY4477 hypothetical protein.
 
  
 0.488
Swol_1761
KEGG: dsy:DSY2326 hypothetical protein.
 
     0.468
Swol_1760
KEGG: sat:SYN_02851 Zn-dependent hydrolase including glyoxylases.
       0.453
Swol_1758
KEGG: ctc:CTC00415 conserved membrane-associated protein.
       0.440
Swol_0044
Hypothetical protein; KEGG: bsu:BG10097 unknown.
  
     0.415
Swol_0074
KEGG: dsy:DSY4478 hypothetical protein.
 
   
 0.415
Swol_1193
KEGG: dsy:DSY4477 hypothetical protein.
 
  
 0.413
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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