STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_1781KEGG: tte:TTE0555 predicted acetyltransferase and hydrolase with the alpha/beta hydrolase fold. (403 aa)    
Predicted Functional Partners:
Swol_0965
1,2-diacylglycerol 3-glucosyltransferase; KEGG: mta:Moth_1133 glycosyl transferase, group 1.
     
  0.900
Swol_1662
KEGG: cpe:CPE0249 hypothetical protein.
 
     0.756
Swol_0120
KEGG: bcz:BCZK0794 hypothetical protein.
  
   
 0.749
Swol_1651
Hypothetical protein; KEGG: rfr:Rfer_0804 YecA.
  
     0.728
Swol_1202
Hypothetical protein; KEGG: cac:CAC3587 DNA replication protein DnaD.
  
     0.716
Swol_2536
KEGG: dsy:DSY5032 hypothetical protein.
  
     0.707
Swol_1421
KEGG: eba:ebA552 hypothetical protein.
  
     0.695
rpmA
KEGG: tte:TTE0915 Ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.
   
   0.691
Swol_2187
KEGG: cac:CAC2776 hypothetical protein.
 
    0.691
rplL
LSU ribosomal protein L12P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.
   
   0.689
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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